Why Some People Wake Up at Night and Can’t Go Back to Sleep

For many people, falling asleep isn’t the problem—it’s staying asleep. You drift off at a reasonable time, only to wake up at 2 or 3 a.m. with your mind racing, your body restless, and the frustrating realization that falling back asleep feels impossible. At Sheen Vein (Aesthetics and Functional Medicine) in St. Louis, we hear this concern often. Middle-of-the-night awakenings, also called sleep maintenance insomnia, can leave you feeling drained, irritable, and unable to focus during the day.

So why does this happen, and what can be done about it? Let’s look at the most common causes.

Stress and Cortisol Imbalances

One of the leading culprits behind nighttime awakenings is stress. When we’re under chronic stress, our body produces higher levels of cortisol—the stress hormone. Cortisol naturally rises in the early morning to help us wake up, but if it spikes in the middle of the night, it can pull you out of deep sleep.

Patients often describe waking with a racing mind, a sense of restlessness, or even a rapid heartbeat. Functional medicine approaches may include stress-reduction practices, adaptogenic supplements, and lifestyle adjustments to calm the nervous system and restore natural sleep cycles.

Blood Sugar Fluctuations

Another overlooked cause is blood sugar instability. When blood sugar drops too low during the night, the body releases adrenaline and cortisol to bring levels back up. This can jolt you awake, often around 2–4 a.m. Women with insulin resistance or people eating heavy carb-rich dinners often experience this pattern.

Balancing meals with protein, fiber, and healthy fats, and limiting alcohol or sugary snacks before bed, can reduce these awakenings. For many patients, a nutrition-focused approach makes a big difference in sleep quality.

Hormonal Shifts

For women, especially during perimenopause and menopause, hormone fluctuations are a major driver of middle-of-the-night insomnia. Low estrogen can contribute to hot flashes, night sweats, and restless sleep, while low progesterone reduces the calming, sedative effect that normally supports deep rest.

At Sheen Vein, we often evaluate hormone levels and discuss whether hormone optimization could support better sleep alongside lifestyle adjustments.

Overactive Nervous System

If you find yourself waking in the night with your mind “stuck on overdrive,” it may be due to an overactive sympathetic nervous system—the “fight or flight” response. This can be triggered by anxiety, trauma, or even excessive screen time before bed.

Techniques such as meditation, breathing exercises, or limiting blue-light exposure in the evening can help reset the nervous system. Some patients benefit from functional medicine strategies like magnesium glycinate supplementation, which promotes relaxation and calms the nervous system.

Sleep Disorders

Not all nighttime awakenings are caused by stress or lifestyle. Sleep apnea, restless legs syndrome, and other medical conditions can repeatedly disturb sleep. In sleep apnea, for example, the airway collapses during rest, leading to oxygen drops and sudden awakenings. If you notice snoring, morning headaches, or persistent daytime fatigue, a sleep study may be necessary to rule out these conditions.

Gut and Inflammation Connection

An emerging area of research links gut health with sleep regulation. Gut dysbiosis (imbalances in intestinal bacteria) can alter neurotransmitter production, including serotonin and melatonin—both essential for healthy sleep. Chronic inflammation in the body can also disrupt circadian rhythms.

At Sheen Vein, our functional medicine approach often includes evaluating gut health, since improving digestion and reducing inflammation frequently leads to better, deeper sleep.

Lifestyle Triggers

Sometimes the cause is more straightforward. Common triggers include:

  • Caffeine or alcohol too close to bedtime
  • Irregular sleep schedules
  • Medications such as steroids or stimulants
  • Environmental disruptions like noise, pets, or room temperature

Identifying and adjusting these factors can be surprisingly effective in restoring restful nights.

How to Regain Restful Sleep

Addressing middle-of-the-night insomnia usually requires a whole-person approach. At Sheen Vein (Aesthetics and Functional Medicine), we tailor treatment based on root causes, which may include:

  • Stress management and nervous system regulation
  • Hormone evaluation and optimization
  • Nutritional guidance for blood sugar stability
  • Gut health testing and targeted therapy
  • Sleep hygiene coaching (consistent bedtime, dark room, limiting blue light)

By combining functional medicine with advanced therapies, we help patients break the cycle of waking at night and finally achieve restorative rest.

The Bottom Line

Waking up in the middle of the night and struggling to fall back asleep isn’t just frustrating—it can affect mood, productivity, and long-term health. Whether the cause is stress, hormones, blood sugar, or sleep disorders, there are effective ways to address it.

At Sheen Vein (Aesthetics and Functional Medicine) in St. Louis, we specialize in identifying the underlying reasons behind sleep disruption and creating personalized solutions. If poor sleep has been leaving you exhausted, it may be time for a functional evaluation to restore balance and bring back peaceful, uninterrupted nights.